IP Verse

Method And System For Microbiome Analysis - EP3097211

The patent EP3097211 was granted to Macrogen on Sep 13, 2023. The application was originally filed on Jan 9, 2015 under application number EP15740133A. The patent is currently recorded with a legal status of "Granted And Under Opposition".

EP3097211

MACROGEN
Application Number
EP15740133A
Filing Date
Jan 9, 2015
Status
Granted And Under Opposition
Aug 11, 2023
Grant Date
Sep 13, 2023
External Links
Slate, Register, Google Patents

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BIOMES NGSJun 4, 2024CH KILGER ANWALTSPARTNERSCHAFT MBBWITHDRAWN

Patent Citations (21) New

Patent citations refer to prior patents cited during different phases such as opposition or international search.

Citation PhasePublication NumberPublication Link
DESCRIPTIONUS2009263809
DESCRIPTIONUS2012004111
DESCRIPTIONUS8380541
DESCRIPTIONWO2008061193
DESCRIPTIONWO2012159023
EXAMINATIONUS2009263809
EXAMINATIONUS8380541
EXAMINATIONWO2006023471
EXAMINATIONWO2009085355
INTERNATIONAL-SEARCH-REPORTUS2010172874
INTERNATIONAL-SEARCH-REPORTUS2012284270
INTERNATIONAL-SEARCH-REPORTWO2012162267
INTERNATIONAL-SEARCH-REPORTWO9519447
OPPOSITIONWO2015112352
OTHERUS2009263809
OTHERUS8380541
OTHERWO2006023471
OTHERWO2009085355
SEARCHUS2012004111
SEARCHWO2008061193
SEARCHWO2012159023

Non-Patent Literature (NPL) Citations (23) New

NPL citations refer to non-patent references such as research papers, articles, or other publications cited during examination or opposition phases.

Citation PhaseReference TextLink
EXAMINATION- Anonymous, "American Gut - what's in your gut? | Indiegogo", (20140112), URL: https://web.archive.org/web/20140112102805/http://indiegogo.com/projects/american-gut-what-s-in-your-gut--7, (20220203), XP055887019-
EXAMINATION- Anonymous, "uBiome | AngelList", (20140124), URL: https://web.archive.org/web/20140124074422/https://angel.co/ubiome, (20230313), XP093031088-
EXAMINATION- Anonymous, "uBiome - Explore your Microbiome", (20140110), URL: https://web.archive.org/web/20140110074534/http://ubiome.com/pages/how-it-works, (20220203), XP055887025-
EXAMINATION- Anonymous, "uBiome -- Sequencing Your Microbiome | Indiegogo", (20131222), URL: https://web.archive.org/web/20131222023109/http://www.indiegogo.com/projects/ubiome-sequencing-your-microbiome, (20220203), XP055887007-
EXAMINATION- Jones Nicola, "Social network wants to sequence your gut", Nature, (20110908), URL: https://www.nature.com/articles/news.2011.523, (20220203), XP055887012-
EXAMINATION- NECHVATAL ET AL, "Fecal collection, ambient preservation, and DNA extraction for PCR amplification of bacterial and human markers from human feces", JOURNAL OF MICROBIOLOGICAL METHODS, ELSEVIER, AMSTERDAM, NL, (20071121), vol. 72, no. 2, doi:10.1016/J.MIMET.2007.11.007, ISSN 0167-7012, pages 124 - 132, XP022420001
EXAMINATION- KARLSSON FREDRIK H. ET AL, "Gut metagenome in European women with normal, impaired and diabetic glucose control", NATURE, London, vol. 498, no. 7452, doi:10.1038/nature12198, ISSN 0028-0836, (20130529), pages 99 - 103, URL: http://www.nature.com/articles/nature12198, XP093031086
EXAMINATION- ALEXANDER STATNIKOV ET AL, "A comprehensive evaluation of multicategory classification methods for microbiomic data", MICROBIOME, London, UK, (20130101), vol. 1, no. 1, doi:10.1186/2049-2618-1-11, ISSN 2049-2618, page 11, XP055237208
OPPOSITION- Anonymous, "uBiome | AngelList", (20140124), URL: https://web.archive.org/web/20140124074422/https://angel.co/ubiome, (20230313), XP093031088-
OPPOSITION- Anonymous, "uBiome - Explore your Microbiome", (20140110), URL: https://web.archive.org/web/20140110074534/http://ubiome.com/pages/how-it-works, (20220203), XP055887025-
OPPOSITION- Anonymous, "uBiome -- Sequencing Your Microbiome | Indiegogo", (20131222), URL: https://web.archive.org/web/20131222023109/http://www.indiegogo.com/projects/ubiome-sequencing-your-microbiome, (20220203), XP055887007-
OPPOSITION- My.Microbes, "my.microbes Study Information Package", my.microbes Study Information Package; cited as: D8 (my.microbes); particular relevance: document properties; whole document, particularly p. 1, first paragraph; p. 2, second paragraph, l. 3-6; p. 2, last paragraph, last sentence; p. 4, first paragraph, l. 12-13; p. 4, last paragraph; p. 5, first paragraph, l. 5-8 - p. 5, second paragraph completely; p. 6, l. 3-11; p. 10; p. 19-22 (questionnaire); p. 13, fourth paragraph; p. 24, item 1 and 9; p. 25, particularly pictures 1 and 6-9; p. 28; p. 30; graphic on p. 32, pages 1 - 32, URL: https://web.archive.org/web/20141006073118if_/http://my.microbes.eu:80/getPDF.cgi, XP093193160-
OPPOSITION- Seeker, "Know Your Gut: uBiome Sequences Human Bacteria", (20131223), URL: https://www.youtube.com/watch?v=UjdivDJ9cho, XP093192863-
OPPOSITION- Ubiome, "DNews - In the uBiome Lab", (20131224), URL: https://vimeo.com/82638108, XP093172621-
OPPOSITION- Ubiome, "uBiome", (20121117), URL: https://vimeo.com/53757258, XP093172624-
OPPOSITION- Iraad F. Bronner, Michael A. Quail, Harold Swerdlow, Daniel J. Turner, "Improved Protocols for the Illumina Genome Analyzer Sequencing System", Current Protocols in Human Genetics, Hoboken, NJ, USA , John Wiley & Sons, Inc. , doi:10.1002/0471142905.hg1802s62, ISBN 9780471142904, XP055211123
OPPOSITION- Jordan M. Nechvatal, "Fecal collection, ambient preservation, and DNA extraction for PCR amplification of bacterial and human markers from human feces", Journal of Microbiological Methods, (20071121), vol. 72, doi:10.1016/j.mimet.2007.11.007, XP022420001
OPPOSITION- Di Bella Julia M. et al, "High throughput sequencing methods and analysis for microbiome research", JOURNAL OF MICROBIOLOGICAL METHODS, ELSEVIER, AMSTERDAM,, NL, NL , (19000101), vol. 95, no. 3, doi:10.1016/j.mimet.2013.08.011, ISSN 0167-7012, pages 401 - 414, XP028791350
OPPOSITION- Alexander Statnikov et al., "A comprehensive evaluation of multicategory classification methods for microbiomic data", Microbiome, BioMed Central Ltd, UK , (20130101), vol. 1, no. 1, doi:10.1186/2049-2618-1-11, ISSN 2049-2618, page 11, XP055237208
SEARCH- DI BELLA JULIA M ET AL, "High throughput sequencing methods and analysis for microbiome research", JOURNAL OF MICROBIOLOGICAL METHODS, (20130909), vol. 95, no. 3, doi:10.1016/J.MIMET.2013.08.011, ISSN 0167-7012, pages 401 - 414, XP028791350 [A] 1-10 * page 402 *
SEARCH- BARBARA A. METH� ET AL, "A framework for human microbiome research", NATURE, (20120613), vol. 486, no. 7402, doi:10.1038/nature11209, ISSN 0028-0836, pages 215 - 221, XP055397571 [A] 1-10 * the whole document *
SEARCH- MIRJANA RAJILIC-STOJANOVIC ET AL, "Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults", ENVIRONMENTAL MICROBIOLOGY, (20090701), vol. 11, no. 7, doi:10.1111/j.1462-2920.2009.01900.x, ISSN 1462-2912, pages 1736 - 1751, XP055050787 [Y] 3 * page 1746 *
SEARCH- WILLIAM TOTTEY ET AL, "The Human Gut Chip "HuGChip", an Explorative Phylogenetic Microarray for Determining Gut Microbiome Diversity at Family Level", PLOS ONE, (20130517), vol. 8, no. 5, doi:10.1371/journal.pone.0062544, page e62544, XP055397646 [Y] 3 * page 2 *

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