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Phage Resistant Lactic Acid Bacteria - EP3172315

The patent EP3172315 was granted to DSM Assets on Sep 30, 2020. The application was originally filed on Jul 23, 2015 under application number EP15750646A. The patent is currently recorded with a legal status of "Revoked".

EP3172315

DSM ASSETS
Application Number
EP15750646A
Filing Date
Jul 23, 2015
Status
Revoked
Apr 24, 2025
Grant Date
Sep 30, 2020
External Links
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N&H DENMARK APSJun 30, 2021ADMISSIBLE

Patent Citations (1) New

Patent citations refer to prior patents cited during different phases such as opposition or international search.

Citation PhasePublication NumberPublication Link
OPPOSITIONWO2015124718

Non-Patent Literature (NPL) Citations (26) New

NPL citations refer to non-patent references such as research papers, articles, or other publications cited during examination or opposition phases.

Citation PhaseReference TextLink
EXAMINATION- LARBI D ET AL, "DIFFERENT BACTERIOPHAGE RESISTANCE MECHANISMS IN STREPTOCOCCUS SALIVARIUS SUBSP. THERMOPHILUS", JOURNAL OF DAIRY RESEARCH, CAMBRIDGE UNIVERSITY PRESS, CAMBRIDGE, GB, (19920801), vol. 59, no. 3, ISSN 0022-0299, pages 349 - 357, XP000978413-
INTERNATIONAL-SEARCH-REPORT- DAVID O'SULLIVAN ET AL, "Design of a Phage-Insensitive Lactococcal Dairy Starter via Sequential Transfer of Naturally Occurring Conjugative Plasmids", APPLIED AND ENVIRONMENTAL MICROBIOLOGY, (19981101), vol. 64, no. 11, ISSN 0099-2240, pages 4618 - 4622, XP055162132 [A] 1-11 * the whole document *-
INTERNATIONAL-SEARCH-REPORT- JOSEPHSEN J ET AL, "Stacking of three different restriction and modification systems in Lactococcus lactis by cotransformation", PLASMID, NEW YORK,NY, US, vol. 23, no. 1, doi:10.1016/0147-619X(90)90046-F, ISSN 0147-619X, (19900101), pages 71 - 75, (19900101), XP024799478 [A] 1-11 * the whole document *
INTERNATIONAL-SEARCH-REPORT- Marie-Ève Dupuis ET AL, "CRISPR-Cas and restriction-modification systems are compatible and increase phage resistance", Nature Communications, doi:10.1038/ncomms3087, (20130702), URL: http://www.nature.com/ncomms/2013/130702/ncomms3087/pdf/ncomms3087.pdf, (20150116), XP055162707 [X] 7-11 * page 5, column r, paragraph 2 * [A] 1-6
INTERNATIONAL-SEARCH-REPORT- S. MILLS ET AL, "CRISPR analysis of bacteriophage-insensitive mutants (BIMs) of industrial Streptococcus thermophilus - implications for starter design", JOURNAL OF APPLIED MICROBIOLOGY, (20100301), vol. 108, no. 3, doi:10.1111/j.1365-2672.2009.04486.x, ISSN 1364-5072, pages 945 - 955, XP055133027 [AD] 1-11 * the whole document *
INTERNATIONAL-SEARCH-REPORT- HÉLÈNE DEVEAU ET AL, "Phage response to CRISPR-Encoded resistance in Streptococcus thermophilus", vol. 190, no. 4, doi:10.1128/JB.01412-07, ISSN 0021-9193, (20080201), pages 1390 - 1400, JOURNAL OF BACTERIOLOGY, AMERICAN SOCIETY FOR MICROBIOLOGY, US, URL: http://jb.asm.org/content/190/4/1390, (20071207), XP002679468 [A] 1-11 * the whole document *
INTERNATIONAL-SEARCH-REPORT- JENNIFER MAHONY ET AL, "Progress in lactic acid bacterial phage research", MICROBIAL CELL FACTORIES, BIOMED CENTRAL, LONDON, NL, (20140829), vol. 13, no. Suppl 1, doi:10.1186/1475-2859-13-S1-S1, ISSN 1475-2859, page S1, XP021193162 [T] 1-11 * page 9, column l, paragraph 1 *
OPPOSITION- Gifford Katie, "An experimental Investigation of willingness to pay for non-GM and organic food products", American Agricultural Economic Association Annual Meeting, July 24-27, 2005, John C. Bernard, Ulrich C. Toensmeyer, Richard Bacon, Providence, Rhode Island, Providence, Rhode Island,, (20050701), American Agricultural Economic Association Annual Meeting, July 24-27, 2005, (20220905), XP055957791-
OPPOSITION- Patel, "McClean: Plasmid Loss Assay Contents", Open Wet Ware, (20130523), Open Wet Ware, URL: https://openwetware.org/wiki/McClean:_Plasmid _ Loss_Assay, (20220905), XP055957794-
OPPOSITION- SAPRANUSKAS et al., "The Streptococcus thermophilus CRISPR/CAS system provides immunity in Escherichia coli", Nucleic Acids Research, (20110000), vol. 39, no. 21, pages 9275 - 9282, XP055935269-
OPPOSITION- KOONIN et al., "Diversity, classification and evolution of CRISPR-Cas systems", Curr Opin Microbiolo, (20170000), vol. 37, doi:10.1016/j.mib.2017.05.008, pages 67 - 78, XP085276922
OPPOSITION- Joseph M Sturino Klaenhammer Todd Laskin Allen I; Bennett Bennett Joan W Gadd Geoffrey M Laskin Allen I, "Bacteriophage Defense Systems and Strategies for Lactic Acid Bacteria", Advances in Applied Microbiology; [Advances in applied microbiology, United States, Academic Press, (20040000), vol. 56, pages 331 - 378, XP055580663
OPPOSITION- Marie-Ève Dupuis; Villion Manuela; Magadán Alfonso H; Moineau Sylvain, "CRISPR- Cas and restriction-modification systems are compatible and increase phage resistance", Nature Communications, (20130000), vol. 4, no. 2087, pages 1 - 7, XP055162707
OPPOSITION- MAKAROVA et al., "Evolution and classification of the CRISPR-Cas systems", Nat Rev Microbiol, (20110000), vol. 9, no. 6, doi:10.1038/nrmicro2577, pages 467 - 477, XP055932744
OPPOSITION- MAKAROVA KIRA S ET AL, "An updated evolutionary classification of CRISPR-Cas systems.", Nature reviews. Microbiology, Nature Publishing Group, England, England , (20151101), vol. 13, no. 11, doi:10.1038/nrmicro3569, ISSN 1740-1534, pages 722 - 736, XP002767856
OPPOSITION- Mills S; Griffin C; Coffey A; Meijer W C; Hafkamp B; Ross R P, "CRISPR analysis of bacteriophage-insensitive mutants (BIMs) of industrial Streptococcus thermophilus - implications for starter design", J. Appl. Microbiol., (20100000), vol. 108, pages 945 - 955, XP055133027
OPPOSITION- Rodríguez C; Van Der Meulen R; Vaningelgem F; Font De Valdez G; Raya R; De Vuyst L; Mozzi F, "Sensitivity of capsular-producing Streptococcus thermophilus strains to bacteriophage adsorption", Letters in Applied Microbiology, (20080401), vol. 46, no. 4, pages 462 - 468, XP055133031
OPPOSITION- BARRANGOU et al., "CRISPR provides acquired resistance against viruses in prokaryotes", Science, (20070000), vol. 315, doi:10.1126/science.1138140, pages 1709 - 1712, XP002428071
OPPOSITION- Brian Mcdonnell; Mahony Jennifer; Hanemaaijer Laurens; Kouwen Thijs R H M; Van Sinderen Douwe, "Generation of Bacteriophage-Insensitive Mutants of Streptococcus thermophilus via an Antisense RNA CRISPR-Cas Silencing Appraoch", Applied and Environmental Microbiology, (20180000), vol. 84, no. 4, pages 1 - 14, XP055596146
OPPOSITION- Martin Duplessis; Céline M Lévesque; Sylvain Moineau, "Characterization of Streptococcus thermophilus host range phage mutants", Applied and environmental microbiology, (20060000), vol. 72, no. 4, pages 3036 - 3041, XP002679467
OPPOSITION- Hélène Deveau; Rodolphe Barrangou; Josiane E Garneau; Jessica Labonté; Christophe Fremaux; Patrick Boyaval; Dennis A Romero; Philippe Horvath; Sylvain Moineau, "Phage response to CRISPR-encoded resistance in Streptococcus thermophilus", Journal of Bacteriology, (20080000), vol. 190, no. 4, pages 1390 - 1400, XP002679468
OPPOSITION- Sorek Rotem, Lawrence C. Martin, Wiedenheft Blake, "CRISPR-Mediated Adaptive Immune Systems in Bacteria and Archaea", ANNUAL REVIEW OF BIOCHEMISTRY, PALTO ALTO, CA, US, US , (20130602), vol. 82, no. 1, doi:10.1146/annurev-biochem-072911-172315, ISSN 0066-4154, pages 237 - 266, XP055957785
OPPOSITION- Butiuc-Keul Anca, Farkas Anca, Carpa Rahela, Iordache Dumitrana, "CRISPR-Cas System: The Powerful Modulator of Accessory Genomes in Prokaryotes", Microbial Physiology, Horizon Scientific Press, (20220101), vol. 32, no. 1-2, doi:10.1159/000516643, ISSN 2673-1665, pages 2 - 17, XP055957781
OPPOSITION- DERKX et al., "The art of strain improvement of industrial lactic acid bacteria without the use of recombinant DNA technology", Microbial Cell Factories, (20140000), vol. 13, no. 1, doi:10.1186/1475-2859-13-S1-S5, page S5, XP021193168
OPPOSITION- Daniel H. Haft, Jeremy Selengut, Emmanuel F. Mongodin, Karen E. Nelson, "A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic Genomes", PLOS COMPUTATIONAL BIOLOGY, Public Library of Science, US, US , (20050101), vol. 1, no. 6, doi:10.1371/journal.pcbi.0010060, ISSN 1553-734X, page e60, XP055445295
OPPOSITION- Bruce R Levin; Sylvain Moineau; Mary Bushman; Rodolphe Barrangou, "The Population and Evolutionary Dynamics of Phage and Bacteria with CRISPR-Mediated Immunity", PLoS Genetics, (20130314), vol. 9, no. 3, pages 1 - 14, XP055522482

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