High Efficiency Targeted In Situ Genome-Wide Profiling - EP3688157

The patent EP3688157 was granted to Fred Hutchinson Cancer Center on Apr 27, 2022. The application was originally filed on Sep 25, 2018 under application number EP18858858A. The patent is currently recorded with a legal status of "Granted And Under Opposition".

EP3688157

FRED HUTCHINSON CANCER CENTER
Application Number
EP18858858A
Filing Date
Sep 25, 2018
Status
Granted And Under Opposition
Mar 25, 2022
Grant Date
Apr 27, 2022
External Links
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DIAGENODEJan 27, 2023MAIWALDWITHDRAWN

Patent Citations (42) New

Patent citations refer to prior patents cited during different phases such as opposition or international search.

Citation PhasePublication NumberPublication Link
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OPPOSITIONUS2007009937
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Non-Patent Literature (NPL) Citations (10) New

NPL citations refer to non-patent references such as research papers, articles, or other publications cited during examination or opposition phases.

Citation PhaseReference TextLink
EXAMINATION- SIMONE PICELLI ET AL, "Tn5 transposase and tagmentation procedures for massively scaled sequencing projects", GENOME RESEARCH, US, (20140730), vol. 24, no. 12, doi:10.1101/gr.177881.114, ISSN 1088-9051, pages 2033 - 2040, XP055236186
OPPOSITION- Anonymous, "TAM-ChIP combines ChIP and Nextera library preparation", Active Motif, (20170403), pages 1 - 3, XP093026196-
OPPOSITION- SCHMIDL C. et al, "ChlPmentation: fast, robust, low-input ChlP-seq for histones and transcription factors (includes Online Methods)", NAT. METHODS, (20150101), vol. 12, pages 963 - 965+2PP, XP002788177-
OPPOSITION- Zentner Gabriel E. et al, "ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo", Nature Communications, vol. 6, no. 1, doi:10.1038/ncomms9733, pages 1 - 13, XP093026199
OPPOSITION- Peter J Skene et al, "Targeted in situ genome-wide profiling with high efficiency for low cell numbers", Nature Protocols, Nature Publishing Group, GB, GB , (20180501), vol. 13, no. 5, doi:10.1038/nprot.2018.015, ISSN 1754-2189, pages 1006 - 1019, XP055719799
OPPOSITION- Zentner Gabriel E., Henikoff Steven, "High-resolution digital profiling of the epigenome", NATURE REVIEWS GENETICS, Nature Publishing Group, GB, GB , (20141201), vol. 15, no. 12, doi:10.1038/nrg3798, ISSN 1471-0056, pages 814 - 827, XP093026193
OPPOSITION- Junaid Akhtar et al., "TAF-ChIP: An ultra-low input approach for genome wide chromatin immunoprecipitation assay", BioRxiv, doi:10.1101/299727, (20180411), pages 1 - 20, BioRxiv, URL: https://www.biorxiv.org/content/early/2018/04/11/299727.abstract, (20190117), XP002788178
OPPOSITION- Simone Picelli et al, "Tn5 transposase and tagmentation procedures for massively scaled sequencing projects", Genome Research, Cold Spring Harbor Laboratory Press, US, US , (20141201), vol. 24, no. 12, doi:10.1101/gr.177881.114, ISSN 1088-9051, pages 2033 - 2040, XP055236186
OPPOSITION- Peter J Skene, "An efficient targeted nuclease strategy for high-resolution mapping of DNA binding sites", (20170116), doi:10.7554/eLife.21856, XP055719792
SEARCH- PETER J SKENE, "An efficient targeted nuclease strategy for high-resolution mapping of DNA binding sites", ELIFE, (20170116), doi:10.7554/eLife.21856, XP055719792 [X] 15 * figure 1 *

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