Increasing Ornithine Accumulation To Increase High Mannose Glycoform Content Of Recombinant Proteins

Patent No. US11254963 (titled "Increasing Ornithine Accumulation To Increase High Mannose Glycoform Content Of Recombinant Proteins") was filed by Amgen Inc on Nov 6, 2019.

What is this patent about?

’963 is related to the field of recombinant protein production, specifically addressing the challenge of controlling the glycosylation patterns of therapeutic glycoproteins produced in cell culture. Glycosylation, the addition of sugar molecules to proteins, significantly impacts a drug's efficacy, safety, and stability. Variations in glycosylation, particularly the levels of high mannose glycoforms, can affect a protein's pharmacokinetic properties and immunogenicity, making their control crucial for biopharmaceutical manufacturing.

The underlying idea behind ’963 is that the intracellular concentration of ornithine within the host cell directly influences the high mannose glycoform content of the recombinant glycoprotein being produced. By manipulating ornithine metabolism within the cell, one can effectively control the levels of these high mannose structures on the protein. This is achieved by either increasing or decreasing ornithine accumulation through various metabolic interventions.

The claims of ’963 focus on a method for increasing the high mannose glycoform content of a recombinant protein. This involves culturing a host cell expressing the recombinant protein in a cell culture medium supplemented with either ornithine or arginine . The key aspect is that this supplementation leads to an increase in ornithine production within the host cell, resulting in a recombinant protein with a higher high mannose glycoform content compared to a cell culture without these supplements.

In practice, the invention works by exploiting the metabolic pathways involving ornithine. Adding ornithine directly increases its concentration, while adding arginine, a precursor to ornithine, boosts its production via the enzyme arginase. This elevated ornithine level then affects the glycosylation machinery within the cell, leading to the addition of more high mannose structures to the recombinant protein. The patent suggests that this may be due to changes in pH within the Golgi apparatus, where glycosylation occurs, or through disruption of redox homeostasis.

This approach differentiates itself from prior methods by directly targeting ornithine metabolism as a means of controlling glycosylation. While previous studies have shown that cell culture conditions can influence glycosylation, ’963 provides a specific and actionable strategy for manipulating high mannose glycoform content by modulating ornithine levels. This is achieved through the addition of specific compounds like ornithine or arginine, offering a more targeted and potentially predictable way to engineer the glycosylation profile of therapeutic proteins.

How does this patent fit in bigger picture?

Technical landscape at the time

In the early 2010s when ’963 was filed, glycosylation of recombinant proteins was typically implemented using established cell culture techniques, at a time when monitoring and control of glycosylation was a critical parameter for biopharmaceutical manufacturing. Systems commonly relied on controlling cell culture conditions to influence glycosylation patterns, rather than genetic modification of the host cells. Hardware or software constraints made precise, real-time monitoring of intracellular metabolite concentrations non-trivial.

Novelty and Inventive Step

The application was subject to a final rejection. Claims were rejected under 35 U.S.C. 112(b) as being indefinite, under 35 U.S.C. 112(a) for failing to comply with the written description requirement, and under 35 U.S.C. 103 as being unpatentable. Certain claims were withdrawn from consideration as being drawn to a non-elected invention. The prosecution record does NOT describe the technical reasoning or specific claim changes that led to allowance.

Claims

US11,254,963 has 16 claims, with claim 1 being the only independent claim. Independent claim 1 is directed to a method of increasing high mannose glycoform content of a recombinant protein by culturing a host cell expressing the recombinant protein in a cell culture comprising ornithine or arginine. The dependent claims elaborate on the conditions of the method in claim 1, such as specific concentrations of ornithine or arginine, culture types, bioreactor capacity, cell types, and the nature and processing of the recombinant protein.

Key Claim Terms New

Definitions of key terms used in the patent claims.

Term (Source)Support for SpecificationInterpretation
High mannose glycoform content
(Claim 1)
“Glycoproteins produced in mammalian cell culture may contain varied levels of these high mannose (HM or HMN) glycoforms such as Mannose5 (Man5), Mannose6 (Man6), Mannose7 (Man7), Mannose8 (Man8) and Mannose9 (Man9). The high mannose glycoform content of therapeutic proteins is a critical quality attribute that has been found to affect pharmacokinetic properties of certain therapeutic antibodies.”The amount of high mannose glycoforms (HM or HMN) such as Mannose5 (Man5), Mannose6 (Man6), Mannose7 (Man7), Mannose8 (Man8) and Mannose9 (Man9) present in a recombinant glycoprotein.
Ornithine production
(Claim 1)
“The invention provides a method for manipulating the high mannose glycoform content of recombinant glycoproteins by regulating ornithine metabolism in the host cells. In one embodiment ornithine metabolism in the host cell is regulated by decreasing the accumulation of ornithine in the host cell. In another embodiment ornithine metabolism in the host cell is regulated by increasing the accumulation of ornithine in the host cell.”The generation or synthesis of ornithine within the host cell.

Litigation Cases New

US Latest litigation cases involving this patent.

Case NumberFiling DateTitle
1:25-cv-17596Nov 14, 2025AMGEN INC. et al v. ALKEM LABORATORIES LTD. et al
1:25-cv-17278Nov 6, 2025AMGEN INC. v. AMNEAL PHARMACEUTICALS, INC.
1:25-cv-17277Nov 6, 2025AMGEN INC. v. DR. REDDY'S LABORATORIES LTD.
1:25-cv-13358Jul 16, 2025Amgen Inc. V. Biocon Biologics, Inc.
1:25-cv-11867Jun 30, 2025Amgen Inc. V. Biocon Biologics, Inc.
1:25-cv-01080Feb 7, 2025Amgen Inc. V. Fresenius Kabi Usa, Llc

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US11254963

AMGEN INC
Application Number
US16676340
Filing Date
Nov 6, 2019
Status
Granted
Expiry Date
Dec 9, 2034
External Links
Slate, USPTO, Google Patents