Methods For Increasing Mannose Content Of Recombinant Proteins

Patent No. US11946085 (titled "Methods For Increasing Mannose Content Of Recombinant Proteins") was filed by Amgen Inc on Apr 13, 2023.

What is this patent about?

’085 is related to the field of recombinant protein production in mammalian cell cultures, specifically addressing the challenge of controlling the glycosylation patterns of therapeutic proteins. Glycosylation, the addition of sugar molecules to proteins, significantly impacts a protein's efficacy and safety. Achieving a consistent and desired glycosylation profile, particularly the level of high mannose glycoforms, is crucial for therapeutic protein development.

The underlying idea behind ’085 is that the mannose-to-total-hexose ratio in the cell culture medium can be manipulated to predictably upregulate the high mannose glycoform content of a recombinant protein. By carefully controlling the relative amounts of mannose and other hexose sugars (like glucose) in the medium, the cell's glycosylation machinery can be influenced to produce proteins with a higher proportion of high mannose structures.

The claims of ’085 focus on a method for controlling the Mannose-5 glycoform content of denosumab molecules, measured as a percentage, and increased compared to a control value. The method involves establishing a CHO cell culture in a bioreactor with cells expressing denosumab, initially in a medium without mannose. The cells are grown until a viable cell density of at least 3x10^6 cells/mL is reached, then switched to a second medium containing both mannose and glucose, with a mannose-to-total-hexose ratio between 0.1 and 0.4 . Finally, the denosumab molecules are recovered.

In practice, the method involves a two-stage culture process. Initially, the CHO cells are grown in a standard medium to achieve a high cell density. Once the desired cell density is reached, the culture is switched to a specialized medium with a controlled mannose-to-total-hexose ratio. This shift in the nutrient environment alters the cell's metabolic pathways, specifically influencing the glycosylation enzymes responsible for adding and processing sugar molecules on the recombinant protein. The denosumab molecules are then harvested and purified.

Prior approaches to controlling glycosylation often involved trial-and-error adjustments to various culture parameters like temperature, pH, or osmolality. ’085 differentiates itself by providing a more direct and predictable method based on the precise control of sugar ratios in the culture medium. This approach allows for fine-tuning the high mannose glycoform content of the recombinant protein without significantly impacting cell growth or productivity, offering a more robust and scalable solution for therapeutic protein manufacturing.

How does this patent fit in bigger picture?

Technical landscape at the time

In the early 2010s when ’085 was filed, cell culture processes for producing recombinant proteins, particularly therapeutic antibodies, were well-established. At a time when controlling glycosylation patterns was recognized as a critical quality attribute, methods for manipulating glycoform content, such as adjusting media composition, temperature, and pH, were commonly employed, even though their effectiveness was often cell line and molecule-specific, requiring empirical optimization.

Novelty and Inventive Step

The examiner allowed the claims because the amended claims, which specify a mannose to total hexose concentration ratio between 0.1 and 0.4 in the second medium, were deemed non-obvious over the cited prior art. The examiner agreed with the applicant's argument that the prior art (Follstad) focused on sialylation rather than high mannose modification of recombinant proteins like denosumab, and therefore, there would have been no reason to optimize the mannose to hexose ratio as claimed.

Claims

This patent contains 30 claims, of which claims 1, 14, and 22 are independent. The independent claims focus on methods for controlling Mannose-5 glycoform content of denosumab molecules by adjusting cell culture media. The dependent claims generally elaborate on specific conditions, purification steps, or formulations related to the methods described in the independent claims.

Key Claim Terms New

Definitions of key terms used in the patent claims.

Term (Source)Support for SpecificationInterpretation
Denosumab molecules
(Claim 1, Claim 14, Claim 22)
“The present invention provides a method for upregulating the high mannose glycoform content of a recombinant protein during a mammalian cell culture process comprising; establishing a mammalian cell culture in a bioreactor with a cell culture media that does not contain mannose; and maintaining the cell culture with a cell culture media containing mannose, wherein the mannose to total hexose ratio in the cell culture media is greater than 0 but less than 1.0.”Denosumab molecules are recovered from the cell culture.
First cell culture medium
(Claim 1, Claim 14)
“The present invention provides a method for upregulating the high mannose glycoform content of a recombinant protein during a mammalian cell culture process comprising; establishing a mammalian cell culture in a bioreactor with a cell culture media that does not contain mannose; and maintaining the cell culture with a cell culture media containing mannose, wherein the mannose to total hexose ratio in the cell culture media is greater than 0 but less than 1.0.”A cell culture medium that does not contain mannose.
Mannose-5 glycoform content
(Claim 1, Claim 14, Claim 22)
“Proteins produced in mammalian cell cultures may contain varied levels of high mannose glycoforms such as Mannose5 (Man5), Mannose6 (Man6), Mannose7 (Man7), Mannose8 (Man8) and Mannose9 (Man9). High mannose glycoform content of therapeutic proteins is a critical quality attribute that has been found to affect pharmacokinetic properties of certain therapeutic antibodies (Goetze, et al., (2011) Glycobiology 21, 949-59; Yu, et al., 2012) MAbs 4, 475-87).”The amount of Mannose-5 glycoforms present in denosumab molecules, measured as a percentage.
Second culture medium
(Claim 1, Claim 14, Claim 22)
“The present invention provides a cell culture media containing mannose, wherein the mannose to total hexose ratio in the cell culture media is greater than 0 but less than 1.0.”A cell culture medium that contains both mannose and glucose, and where the ratio of mannose concentration to total hexose concentration is between 0.1 and 0.4.
Total hexose concentration
(Claim 1, Claim 14, Claim 22)
“The invention provides a method that regulates high mannose glycoform content by manipulating the mannose to total hexose ratio in cell culture media.”The total concentration of hexose sugars in the cell culture medium.

Litigation Cases New

US Latest litigation cases involving this patent.

Case NumberFiling DateTitle
1:25-cv-17596Nov 14, 2025AMGEN INC. et al v. ALKEM LABORATORIES LTD. et al
1:25-cv-17278Nov 6, 2025AMGEN INC. v. AMNEAL PHARMACEUTICALS, INC.
1:25-cv-17277Nov 6, 2025AMGEN INC. v. DR. REDDY'S LABORATORIES LTD.
1:25-cv-13358Jul 16, 2025Amgen Inc. V. Biocon Biologics, Inc.
1:25-cv-11867Jun 30, 2025Amgen Inc. V. Biocon Biologics, Inc.
1:25-cv-01080Feb 7, 2025Amgen Inc. V. Fresenius Kabi Usa, Llc

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US11946085

AMGEN INC
Application Number
US18134291
Filing Date
Apr 13, 2023
Status
Granted
Expiry Date
May 29, 2034
External Links
Slate, USPTO, Google Patents