Subtypes of humanized antibody against interleukin-6 receptor

Patent No. US8398980 (titled "Subtypes of humanized antibody against interleukin-6 receptor") on Mar 24, 2005. The application was issued on Mar 19, 2013.

What is this patent about?

’980 is related to the field of recombinant protein production and the characterization of monoclonal antibody variants. Specifically, it addresses the structural heterogeneity that occurs during the biosynthesis of humanized antibodies in host cells, where post-translational modifications can lead to multiple molecular subtypes within a single pharmaceutical batch.

The underlying idea behind ’980 is that specific C-terminal modifications to the heavy chain of the PM-1 antibody—specifically the loss of a terminal glycine and the subsequent amidation of the proline residue at position 447—result in distinct subtypes that maintain full biological potency. The invention recognizes that these amidated variants are not merely degradation products but functional isoforms that can be characterized and utilized in pharmaceutical compositions.

The claims of ’980 focus on two specific molecular architectures of the humanized PM-1 antibody targeting the interleukin-6 receptor. Subtype 1 is defined as a heterodimeric variant where one heavy chain retains the standard C-terminal glycine while the other ends in an amidated proline, whereas Subtype 2 is a homodimeric variant where both heavy chains are truncated and amidated at the proline-447 position.

In practice, these subtypes are generated during cell culture, particularly when using specific growth media such as those containing fish meat-derived peptones. The invention utilizes liquid chromatography and mass spectrometry to isolate and verify these structures, ensuring that the resulting pharmaceutical product is well-characterized. This level of structural detail is critical for meeting the stringent quality and consistency requirements for injectable biologic drugs.

This approach differs from prior methods by identifying and validating the therapeutic equivalence of these specific C-terminal isoforms. While traditional manufacturing might view such variations as impurities, ’980 demonstrates that these amidated subtypes retain identical antigen-binding and cell-growth inhibition properties as the native sequence, allowing for a more precise definition of the active ingredients in anti-IL-6R therapies.

How does this patent fit in bigger picture?

Technical Landscape

In the mid-2000s when ’980 was filed, the production of therapeutic proteins through recombinant DNA technology was a standard industrial practice, at a time when molecular heterogeneity was typically implemented using complex biosynthetic pathways in host cells. While the primary amino acid sequences of monoclonal antibodies were predictable from genetic templates, systems commonly relied on post-translational modifications and non-enzymatic proteolysis to define the final molecular profile, making the isolation of specific variants non-trivial. During this era, characterizing the precise structural subtypes of humanized antibodies was a critical engineering constraint for ensuring the consistency and quality of pharmaceutical compositions derived from biological sources.

Prosecution Position

The disclosed invention represents a technical advancement through the identification and isolation of specific C-terminal heavy chain variants of the humanized PM-1 antibody, specifically addressing the problem of molecular heterogeneity in IL-6 receptor antagonists. The architectural solution involves the characterization of subtypes where the C-terminal glycine is removed and the preceding proline is amidated, either on a single heavy chain or both. This structural shift enables the production of a defined pharmaceutical composition that maintains full antigen-binding and cell growth-inhibiting activity while providing a stabilized molecular profile. By isolating these specific amidated forms, the invention overcomes the technical constraint of unpredictable protein variant mixtures, ensuring a more uniform and characterized therapeutic agent.

Claims

The patent contains a total of 10 claims, with claims 1, 5, and 10 being independent. The independent claims focus on specific subtypes of a humanized antibody targeting the interleukin-6 receptor, defined by particular heavy and light chain amino acid sequences and C-terminal modifications, as well as pharmaceutical compositions containing these subtypes. The dependent claims serve to further specify chemical modifications to the heavy chain N-terminal, such as the replacement of glutamine with pyroglutamic acid, and to define various pharmaceutical formulations incorporating the specified antibody subtypes.

Key Claim Terms New

Definitions of key terms used in the patent claims.

Term (Source)Support for SpecificationInterpretation
Antibody subtype (1)
(Claim 1, Claim 10)
After careful separation of the recombinantly produced humanized PM-1 antibody, the present inventors have found that there is... an antibody subtype (referred to as subtype 1) in which only one of the two heavy chains constituting the antibody has been amidated. The present invention provides an antibody subtype (1) which is a subtype of the humanized PM-1 antibody against interleukin-6 receptor (IL-6R) and in which one C-terminal of the heavy chain is Pro-NH2 (447).A specific molecular variant of the humanized PM-1 antibody where only one of the two heavy chains has been modified to lose the C-terminal Gly (448) and have the resulting C-terminal Pro (447) amidated.
Antibody subtype (2)
(Claim 5, Claim 10)
The present inventors have found... an antibody subtype (referred to as subtype 2) in which both [heavy chains] have been amidated. The present invention provides... an antibody subtype (2) which is a subtype of the humanized PM-1 antibody against interleukin-6 receptor (IL-6R) and in which both C-terminals of the heavy chain are Pro-NH2 (447).A specific molecular variant of the humanized PM-1 antibody where both heavy chains have been modified to lose the C-terminal Gly (448) and have the resulting C-terminal Pro (447) amidated.
Humanized PM-1 antibody
(Claim 1, Claim 5, Claim 10)
A known Humanized PM-1 antibody was obtained by transplanting the complementarity determining region (CDR) of a mouse antibody PM-1 (Hirata, Y. et al., J. Immunol. (1989) 143, 2900-2906), to a human antibody (International Patent Publication WO 92-19759). The native heavy chain C-terminal of the humanized PM-1 antibody corresponding to both of the above subtypes is Gly (448).An antibody against the interleukin-6 receptor (IL-6R) created by transplanting the complementarity determining region (CDR) of the mouse antibody PM-1 into a human antibody framework.
Pro-NH 2
(Claim 1, Claim 5, Claim 10)
The present inventors have found that there is a molecular species in which Gly at the C-terminal (position 448) of the constant region constituting the heavy chain of the humanized PM-1 antibody is lost and Pro at position 447 has been amidated. The native heavy chain C-terminal of the humanized PM-1 antibody corresponding to both of the above subtypes is Gly (448).An amidated proline residue located at the C-terminal (position 447) of a heavy chain, resulting from the loss of the original C-terminal glycine (448).

Litigation Cases New

US Latest litigation cases involving this patent.

Case NumberFiling DateTitle
1:23-cv-11573Jul 13, 2023Genentech, Inc. V. Biogen Ma Inc.

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US8398980

Application Number
US10593786A
Filing Date
Mar 24, 2005
Publication Date
Mar 19, 2013
External Links
Slate, USPTO , Google Patents