Subtypes of humanized antibody against interleukin-6 receptor

Patent No. US8734800 (titled "Subtypes of humanized antibody against interleukin-6 receptor") on Dec 20, 2012. The application was issued on May 27, 2014.

What is this patent about?

’800 is related to the field of recombinant antibody production and the characterization of molecular variants that arise during the manufacturing of therapeutic proteins. Specifically, it addresses the identification and clinical use of specific subtypes of the humanized PM-1 antibody, which targets the interleukin-6 receptor (IL-6R) to treat inflammatory and autoimmune disorders. While recombinant technology aims for uniform protein sequences, post-translational modifications often create structural variants that must be characterized to ensure pharmaceutical consistency and efficacy.

The underlying idea behind ’800 is that specific C-terminal modifications of the antibody heavy chain—specifically the loss of a terminal glycine and the subsequent amidation of the proline residue at position 447—result in stable, functional antibody subtypes. The inventors discovered that these modifications can occur on either one or both heavy chains of the PM-1 antibody without compromising the molecule’s ability to bind to its target or inhibit cell growth. This insight allows for the formal inclusion of these naturally occurring variants in pharmaceutical compositions, ensuring that the therapeutic profile remains robust even when these specific isoforms are present.

The claims of ’800 focus on methods for inhibiting IL-6R activity and treating conditions like rheumatoid arthritis using specific antibody subtypes characterized by C-terminal amidation. The independent claims cover three primary configurations: a subtype where only one heavy chain is amidated at Pro-447, a subtype where both heavy chains are amidated, and compositions that combine these two variants. These claims explicitly require the heavy chains to feature a pyroglutamylated N-terminal glutamine and a specific light chain sequence, defining the precise molecular architecture of the therapeutic agent.

In practice, these subtypes are generated during the cultivation of host cells, such as CHO cells, particularly when using specific growth media like those containing fish meat-derived peptones. The invention utilizes liquid chromatography and mass spectrometry to isolate and verify these variants, confirming that the terminal glycine (position 448) is removed and the remaining proline is converted to Pro-NH2. This rigorous characterization ensures that the resulting pharmaceutical product meets strict quality standards while acknowledging the inherent heterogeneity of biological manufacturing.

This approach differs from prior art by identifying and validating specific, functional isoforms of the PM-1 antibody that were previously uncharacterized. Rather than viewing these variants as impurities or degradation products, the invention demonstrates that the amidated subtypes retain full biological potency, including antigen-binding and cell growth-inhibiting activities, identical to the native sequence. By defining these specific C-terminal modifications, the patent provides a clear framework for utilizing these variants in the treatment of chronic inflammatory diseases like juvenile idiopathic arthritis.

How does this patent fit in bigger picture?

Technical Landscape

In the mid-2000s when ’800 was filed, the production of therapeutic proteins via recombinant DNA technology was a standard industrial practice, at a time when such biological products were typically implemented using large-scale mammalian cell culture systems. During this era, when systems commonly relied on complex biosynthetic pathways for post-translational modification rather than purely synthetic chemical processes, the resulting protein products were known to exhibit inherent heterogeneity. Because these biological systems often introduced non-enzymatic proteolysis or enzymatic modifications during the expression and purification phases, characterizing the specific molecular variants or subtypes within a batch was a critical engineering requirement for ensuring pharmaceutical consistency, particularly when hardware or software constraints in analytical chromatography made the isolation of minor structural isoforms non-trivial.

Prosecution Position

The disclosed invention addresses the technical problem of identifying and characterizing specific molecular variants of the humanized PM-1 antibody that arise during recombinant production. The architectural solution involves the isolation of two distinct antibody subtypes characterized by a specific C-terminal modification: the loss of a C-terminal glycine and the amidation of the resulting C-terminal proline on either one or both heavy chains. This represents a meaningful technical advancement by enabling the precise definition of a pharmaceutical composition's molecular profile. The technical effect achieved is the confirmation that these specific amidated subtypes maintain the same antigen-binding and cell growth-inhibiting activity as the native sequence, thereby overcoming the constraint of product heterogeneity by validating the functional equivalence of these naturally occurring variants.

Claims

This patent contains 36 claims, including independent claims 1, 8, 15, 22, 27, and 32, which focus on methods for inhibiting interleukin-6 receptor activity and treating conditions such as rheumatoid arthritis or juvenile idiopathic arthritis using specific antibody subtypes characterized by defined heavy and light chain amino acid sequences and C-terminal modifications. The dependent claims serve to narrow the scope of these methods by specifying the use of pharmaceutical compositions, identifying particular disease subtypes like systemic idiopathic arthritis, and defining the production of the antibodies within Chinese Hamster Ovary cells.

Key Claim Terms New

Definitions of key terms used in the patent claims.

Term (Source)Support for SpecificationInterpretation
Antibody subtype
(Claim 1, Claim 8, Claim 15, Claim 22, Claim 27, Claim 32)
After careful separation of the recombinantly produced humanized PM-1 antibody, the present inventors have found that there is a molecular species in which Gly at the C-terminal (position 448) of the constant region constituting the heavy chain of the humanized PM-1 antibody is lost and Pro at position 447 has been amidated. The present invention provides an antibody subtype (1) in which one C-terminal of the heavy chain is Pro-NH2 (447), and an antibody subtype (2) in which both C-terminals of the heavy chain are Pro-NH2 (447). The native heavy chain C-terminal of the humanized PM-1 antibody corresponding to both of the above subtypes is Gly (448).A molecular species of the humanized PM-1 antibody against IL-6R characterized by specific post-translational modifications at the C-terminal of the heavy chain, specifically the loss of Gly (448) and amidation of Pro (447).
Humanized PM-1 antibody
(Claim 1, Claim 8, Claim 15, Claim 22, Claim 27, Claim 32)
The present invention relates to novel subtypes of the humanized PM-1 antibody which is an antibody against interleukin-6 receptor (IL-6R). A known Humanized PM-1 antibody was obtained by transplanting the complementarity determining region (CDR) of a mouse antibody PM-1 to a human antibody (International Patent Publication WO 92-19759). In a preferred embodiment, the native heavy chain corresponding to the amidated heavy chain subtype has the amino acid sequence set forth in SEQ ID NO: 1.An antibody against the interleukin-6 receptor (IL-6R) created by transplanting the complementarity determining regions (CDRs) of the mouse PM-1 antibody into a human antibody framework.
Pro-NH 2
(Claim 1, Claim 8, Claim 15, Claim 22, Claim 27, Claim 32)
The present inventors have found that there is a molecular species in which Gly at the C-terminal (position 448) of the constant region constituting the heavy chain of the humanized PM-1 antibody is lost and Pro at position 447 has been amidated. The present invention provides an antibody subtype (1) which is a subtype of the humanized PM-1 antibody against interleukin-6 receptor (IL-6R) and in which one C-terminal of the heavy chain is Pro-NH2 (447). Subtype (2) is a subtype in which both C-terminals of the heavy chain are Pro-NH2 (447).An amidated proline residue located at the C-terminal (position 447) of the antibody heavy chain, resulting from the loss of the original C-terminal glycine.
Pyroglutamylated
(Claim 1, Claim 8, Claim 15, Claim 22, Claim 27, Claim 32)
In a preferred embodiment, glutamine (Gln) at the heavy chain N-terminal has been replaced with pyroglutamic acid (pGlu). This modification is part of the characterization of the heavy chain that has amino acids 1-448 or 1-447 of the amino acid sequence set forth in SEQ ID NO: 1.A modification of the N-terminal of the antibody heavy chain where the initial glutamine (Gln) residue is converted into pyroglutamic acid (pGlu).

Litigation Cases New

US Latest litigation cases involving this patent.

Case NumberFiling DateTitle
1:23-cv-11573Jul 13, 2023Genentech, Inc. V. Biogen Ma Inc.

Patent Family

Patent Family

File Wrapper

The dossier documents provide a comprehensive record of the patent's prosecution history - including filings, correspondence, and decisions made by patent offices - and are crucial for understanding the patent's legal journey and any challenges it may have faced during examination.

  • Get instant alerts for new documents

US8734800

Application Number
US13722919A
Filing Date
Dec 20, 2012
Publication Date
May 27, 2014
External Links
Slate, USPTO , Google Patents